Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 AP002469.2-201ENST00000531724 424 ntBASIC17.69■□□□□ 0.42
PCCBP05166 AL160237.2-201ENST00000556165 472 ntBASIC17.69■□□□□ 0.42
PCCBP05166 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.69■□□□□ 0.42
PCCBP05166 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.69■□□□□ 0.42
PCCBP05166 AC104692.2-201ENST00000603054 253 ntBASIC17.69■□□□□ 0.42
PCCBP05166 AC008608.2-201ENST00000606089 416 ntBASIC17.69■□□□□ 0.42
PCCBP05166 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.69■□□□□ 0.42
PCCBP05166 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PCCBP05166 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.69■□□□□ 0.42
PCCBP05166 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCCBP05166 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCCBP05166 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCCBP05166 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.68■□□□□ 0.42
PCCBP05166 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCCBP05166 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.68■□□□□ 0.42
PCCBP05166 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.68■□□□□ 0.42
PCCBP05166 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.68■□□□□ 0.42
PCCBP05166 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PCCBP05166 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.68■□□□□ 0.42
PCCBP05166 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCCBP05166 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.68■□□□□ 0.42
PCCBP05166 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.68■□□□□ 0.42
PCCBP05166 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PCCBP05166 AC100803.2-201ENST00000562459 1963 ntBASIC17.68■□□□□ 0.42
PCCBP05166 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCCBP05166 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.67■□□□□ 0.42
PCCBP05166 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCCBP05166 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.67■□□□□ 0.42
PCCBP05166 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCCBP05166 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 FAM220CP-201ENST00000395253 831 ntBASIC17.67■□□□□ 0.42
PCCBP05166 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.67■□□□□ 0.42
PCCBP05166 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.67■□□□□ 0.42
PCCBP05166 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.67■□□□□ 0.42
PCCBP05166 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.67■□□□□ 0.42
PCCBP05166 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.67■□□□□ 0.42
PCCBP05166 AP001269.4-201ENST00000609611 512 ntBASIC17.67■□□□□ 0.42
PCCBP05166 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PCCBP05166 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCCBP05166 TP73-AS1-207ENST00000624167 988 ntBASIC17.67■□□□□ 0.42
PCCBP05166 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCCBP05166 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCCBP05166 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCCBP05166 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.66■□□□□ 0.42
PCCBP05166 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCCBP05166 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 AC010460.3-201ENST00000511359 1579 ntBASIC17.66■□□□□ 0.42
PCCBP05166 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.66■□□□□ 0.42
PCCBP05166 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.66■□□□□ 0.42
PCCBP05166 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCCBP05166 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.66■□□□□ 0.42
PCCBP05166 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCCBP05166 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms