Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND1P03886 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MT-ND1P03886 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND1P03886 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
MT-ND1P03886 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MT-ND1P03886 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.9■□□□□ 0.3
MT-ND1P03886 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND1P03886 OR6D1P-203ENST00000641209 4860 ntBASIC16.9■□□□□ 0.3
MT-ND1P03886 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MT-ND1P03886 MIR149-201ENST00000384879 89 ntBASIC16.9■□□□□ 0.3
MT-ND1P03886 AC098590.1-201ENST00000468126 897 ntBASIC16.9■□□□□ 0.3
MT-ND1P03886 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND1P03886 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.9■□□□□ 0.3
MT-ND1P03886 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.9■□□□□ 0.3
MT-ND1P03886 AP001412.1-201ENST00000608405 714 ntBASIC16.9■□□□□ 0.3
MT-ND1P03886 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.9■□□□□ 0.3
MT-ND1P03886 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.9■□□□□ 0.3
MT-ND1P03886 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND1P03886 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND1P03886 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.89■□□□□ 0.3
MT-ND1P03886 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MT-ND1P03886 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND1P03886 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.89■□□□□ 0.29
MT-ND1P03886 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MT-ND1P03886 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MT-ND1P03886 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND1P03886 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MT-ND1P03886 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND1P03886 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MT-ND1P03886 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND1P03886 RPS2P55-201ENST00000397318 883 ntBASIC16.89■□□□□ 0.29
MT-ND1P03886 MFAP1P1-201ENST00000442257 1255 ntBASIC16.89■□□□□ 0.29
MT-ND1P03886 GCSHP5-201ENST00000443090 522 ntBASIC16.89■□□□□ 0.29
MT-ND1P03886 AC107956.1-201ENST00000494359 873 ntBASIC16.89■□□□□ 0.29
MT-ND1P03886 SLC25A1P4-201ENST00000567977 778 ntBASIC16.89■□□□□ 0.29
MT-ND1P03886 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND1P03886 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND1P03886 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MT-ND1P03886 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND1P03886 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-ND1P03886 AL139384.1-201ENST00000612143 3047 ntBASIC16.88■□□□□ 0.29
MT-ND1P03886 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-ND1P03886 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MT-ND1P03886 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MT-ND1P03886 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MT-ND1P03886 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-ND1P03886 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
MT-ND1P03886 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
MT-ND1P03886 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-ND1P03886 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 ABHD17AP1-201ENST00000358206 933 ntBASIC16.88■□□□□ 0.29
MT-ND1P03886 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MT-ND1P03886 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-ND1P03886 AC012618.2-201ENST00000428058 849 ntBASIC16.88■□□□□ 0.29
MT-ND1P03886 AL158047.1-201ENST00000445918 881 ntBASIC16.88■□□□□ 0.29
MT-ND1P03886 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.88■□□□□ 0.29
MT-ND1P03886 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-ND1P03886 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
MT-ND1P03886 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 PCDH8P1-201ENST00000428983 2773 ntBASIC16.88■□□□□ 0.29
MT-ND1P03886 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND1P03886 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND1P03886 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.87■□□□□ 0.29
MT-ND1P03886 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND1P03886 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MT-ND1P03886 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.87■□□□□ 0.29
MT-ND1P03886 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms