Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL5O76039 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CDKL5O76039 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL5O76039 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CDKL5O76039 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
CDKL5O76039 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDKL5O76039 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 LINC00896-202ENST00000609602 2128 ntBASIC20.8■□□□□ 0.92
CDKL5O76039 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL5O76039 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.8■□□□□ 0.92
CDKL5O76039 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL5O76039 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL5O76039 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.8■□□□□ 0.92
CDKL5O76039 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CDKL5O76039 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CDKL5O76039 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CDKL5O76039 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL5O76039 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL5O76039 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.79■□□□□ 0.92
CDKL5O76039 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL5O76039 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL5O76039 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL5O76039 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL5O76039 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL5O76039 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL5O76039 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL5O76039 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL5O76039 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDKL5O76039 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDKL5O76039 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.79■□□□□ 0.92
CDKL5O76039 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDKL5O76039 MTCL1P1-201ENST00000446207 792 ntBASIC20.79■□□□□ 0.92
CDKL5O76039 AC068472.1-201ENST00000474589 881 ntBASIC20.79■□□□□ 0.92
CDKL5O76039 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDKL5O76039 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.79■□□□□ 0.92
CDKL5O76039 AL121956.5-201ENST00000625261 221 ntBASIC20.79■□□□□ 0.92
CDKL5O76039 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDKL5O76039 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL5O76039 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.79■□□□□ 0.92
CDKL5O76039 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDKL5O76039 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL5O76039 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.79■□□□□ 0.92
CDKL5O76039 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDKL5O76039 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CDKL5O76039 AC009949.1-201ENST00000623048 1830 ntBASIC20.78■□□□□ 0.92
CDKL5O76039 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDKL5O76039 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL5O76039 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL5O76039 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDKL5O76039 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKL5O76039 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL5O76039 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKL5O76039 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL5O76039 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKL5O76039 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDKL5O76039 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKL5O76039 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL5O76039 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CDKL5O76039 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.77■□□□□ 0.92
CDKL5O76039 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDKL5O76039 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.77■□□□□ 0.92
CDKL5O76039 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL5O76039 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.77■□□□□ 0.92
CDKL5O76039 AL031133.1-201ENST00000406807 723 ntBASIC20.77■□□□□ 0.92
CDKL5O76039 TSPY22P-201ENST00000427496 604 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms