Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A3O75365 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A3O75365 RASA4DP-201ENST00000460726 1199 ntBASIC16.12■□□□□ 0.17
PTP4A3O75365 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.12■□□□□ 0.17
PTP4A3O75365 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.12■□□□□ 0.17
PTP4A3O75365 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A3O75365 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.12■□□□□ 0.17
PTP4A3O75365 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.12■□□□□ 0.17
PTP4A3O75365 AC145285.6-201ENST00000604632 637 ntBASIC16.12■□□□□ 0.17
PTP4A3O75365 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.12■□□□□ 0.17
PTP4A3O75365 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTP4A3O75365 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PTP4A3O75365 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PTP4A3O75365 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 CROCCP2-202ENST00000412962 2773 ntBASIC16.11■□□□□ 0.17
PTP4A3O75365 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 AC009053.2-201ENST00000563701 2365 ntBASIC16.11■□□□□ 0.17
PTP4A3O75365 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 DDX43P3-201ENST00000441064 443 ntBASIC16.11■□□□□ 0.17
PTP4A3O75365 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
PTP4A3O75365 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A3O75365 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 KRT8P47-201ENST00000604727 1398 ntBASIC16.11■□□□□ 0.17
PTP4A3O75365 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A3O75365 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.1■□□□□ 0.17
PTP4A3O75365 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
PTP4A3O75365 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.1■□□□□ 0.17
PTP4A3O75365 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.1■□□□□ 0.17
PTP4A3O75365 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.1■□□□□ 0.17
PTP4A3O75365 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PTP4A3O75365 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTP4A3O75365 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.1■□□□□ 0.17
PTP4A3O75365 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.1■□□□□ 0.17
PTP4A3O75365 AC140113.3-201ENST00000605663 199 ntBASIC16.1■□□□□ 0.17
PTP4A3O75365 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.1■□□□□ 0.17
PTP4A3O75365 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.1■□□□□ 0.17
PTP4A3O75365 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
PTP4A3O75365 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 PCDHA12-202ENST00000613593 2588 ntBASIC16.1■□□□□ 0.17
PTP4A3O75365 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTP4A3O75365 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PTP4A3O75365 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
PTP4A3O75365 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
PTP4A3O75365 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PTP4A3O75365 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms