Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.68■□□□□ 0.58
OPHN1O60890 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.68■□□□□ 0.58
OPHN1O60890 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.68■□□□□ 0.58
OPHN1O60890 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.68■□□□□ 0.58
OPHN1O60890 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
OPHN1O60890 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
OPHN1O60890 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.68■□□□□ 0.58
OPHN1O60890 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.68■□□□□ 0.58
OPHN1O60890 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.68■□□□□ 0.58
OPHN1O60890 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
OPHN1O60890 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.68■□□□□ 0.58
OPHN1O60890 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
OPHN1O60890 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.68■□□□□ 0.58
OPHN1O60890 AC012313.1-201ENST00000593393 3059 ntBASIC18.68■□□□□ 0.58
OPHN1O60890 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
OPHN1O60890 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.67■□□□□ 0.58
OPHN1O60890 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.67■□□□□ 0.58
OPHN1O60890 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
OPHN1O60890 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.67■□□□□ 0.58
OPHN1O60890 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
OPHN1O60890 RASA4DP-201ENST00000460726 1199 ntBASIC18.67■□□□□ 0.58
OPHN1O60890 SEC1P-202ENST00000473944 940 ntBASIC18.67■□□□□ 0.58
OPHN1O60890 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.67■□□□□ 0.58
OPHN1O60890 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
OPHN1O60890 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.67■□□□□ 0.58
OPHN1O60890 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.67■□□□□ 0.58
OPHN1O60890 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.67■□□□□ 0.58
OPHN1O60890 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.67■□□□□ 0.58
OPHN1O60890 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.67■□□□□ 0.58
OPHN1O60890 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.67■□□□□ 0.58
OPHN1O60890 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.67■□□□□ 0.58
OPHN1O60890 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
OPHN1O60890 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.66■□□□□ 0.58
OPHN1O60890 KRT8P10-201ENST00000450021 1447 ntBASIC18.66■□□□□ 0.58
OPHN1O60890 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.66■□□□□ 0.58
OPHN1O60890 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
OPHN1O60890 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
OPHN1O60890 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.66■□□□□ 0.58
OPHN1O60890 KRT17P6-201ENST00000453795 1220 ntBASIC18.66■□□□□ 0.58
OPHN1O60890 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.66■□□□□ 0.58
OPHN1O60890 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.66■□□□□ 0.58
OPHN1O60890 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
OPHN1O60890 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.66■□□□□ 0.58
OPHN1O60890 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.66■□□□□ 0.58
OPHN1O60890 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
OPHN1O60890 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPHN1O60890 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPHN1O60890 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
OPHN1O60890 AL024508.2-201ENST00000607749 1894 ntBASIC18.65■□□□□ 0.58
OPHN1O60890 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OPHN1O60890 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms