Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF11O60813 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 KRT18P56-201ENST00000507275 550 ntBASIC18.12■□□□□ 0.49
PRAMEF11O60813 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 AC099336.1-202ENST00000602961 463 ntBASIC18.12■□□□□ 0.49
PRAMEF11O60813 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF11O60813 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF11O60813 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 AC012317.2-201ENST00000623305 2251 ntBASIC18.11■□□□□ 0.49
PRAMEF11O60813 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 AC018470.1-201ENST00000624790 3129 ntBASIC18.11■□□□□ 0.49
PRAMEF11O60813 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 NUS1P1-201ENST00000446295 882 ntBASIC18.11■□□□□ 0.49
PRAMEF11O60813 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 AC011467.2-201ENST00000598425 242 ntBASIC18.11■□□□□ 0.49
PRAMEF11O60813 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 TP73-AS1-210ENST00000637775 1455 ntBASIC18.11■□□□□ 0.49
PRAMEF11O60813 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEF11O60813 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF11O60813 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF11O60813 COX5BP2-201ENST00000392354 334 ntBASIC18.1■□□□□ 0.49
PRAMEF11O60813 POM121L3P-201ENST00000419331 1163 ntBASIC18.1■□□□□ 0.49
PRAMEF11O60813 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF11O60813 AC096582.2-201ENST00000510860 516 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms