Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 KRT18P56-201ENST00000507275 550 ntBASIC16.74■□□□□ 0.27
HCN1O60741 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.74■□□□□ 0.27
HCN1O60741 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.74■□□□□ 0.27
HCN1O60741 AC079602.3-201ENST00000623931 403 ntBASIC16.74■□□□□ 0.27
HCN1O60741 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HCN1O60741 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.74■□□□□ 0.27
HCN1O60741 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 AC012313.1-201ENST00000593393 3059 ntBASIC16.73■□□□□ 0.27
HCN1O60741 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HCN1O60741 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HCN1O60741 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCN1O60741 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.73■□□□□ 0.27
HCN1O60741 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.73■□□□□ 0.27
HCN1O60741 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.73■□□□□ 0.27
HCN1O60741 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCN1O60741 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.73■□□□□ 0.27
HCN1O60741 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.73■□□□□ 0.27
HCN1O60741 AC011498.5-201ENST00000592027 486 ntBASIC16.73■□□□□ 0.27
HCN1O60741 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HCN1O60741 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HCN1O60741 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.73■□□□□ 0.27
HCN1O60741 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.73■□□□□ 0.27
HCN1O60741 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.73■□□□□ 0.27
HCN1O60741 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HCN1O60741 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HCN1O60741 AC138028.4-201ENST00000564984 1845 ntBASIC16.73■□□□□ 0.27
HCN1O60741 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 ESPNP-201ENST00000270691 2015 ntBASIC16.72■□□□□ 0.27
HCN1O60741 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.72■□□□□ 0.27
HCN1O60741 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HCN1O60741 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.72■□□□□ 0.27
HCN1O60741 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 MIR662-201ENST00000384847 95 ntBASIC16.72■□□□□ 0.27
HCN1O60741 ATP5G2P1-201ENST00000433580 426 ntBASIC16.72■□□□□ 0.27
HCN1O60741 SLC25A6P5-201ENST00000435663 894 ntBASIC16.72■□□□□ 0.27
HCN1O60741 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
HCN1O60741 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.72■□□□□ 0.27
HCN1O60741 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.72■□□□□ 0.27
HCN1O60741 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.72■□□□□ 0.27
HCN1O60741 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.72■□□□□ 0.27
HCN1O60741 AL121672.3-201ENST00000608644 468 ntBASIC16.72■□□□□ 0.27
HCN1O60741 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.72■□□□□ 0.27
HCN1O60741 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.72■□□□□ 0.27
HCN1O60741 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.72■□□□□ 0.27
HCN1O60741 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.72■□□□□ 0.27
HCN1O60741 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCN1O60741 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.72■□□□□ 0.27
HCN1O60741 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.71■□□□□ 0.27
HCN1O60741 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.71■□□□□ 0.27
HCN1O60741 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HCN1O60741 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCN1O60741 AC009053.2-201ENST00000563701 2365 ntBASIC16.71■□□□□ 0.27
HCN1O60741 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms