Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.82■□□□□ 0.92
CTNND1O60716 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTNND1O60716 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 AC073592.3-201ENST00000625118 1834 ntBASIC20.81■□□□□ 0.92
CTNND1O60716 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.81■□□□□ 0.92
CTNND1O60716 AC136632.2-201ENST00000512891 861 ntBASIC20.81■□□□□ 0.92
CTNND1O60716 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CTNND1O60716 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.81■□□□□ 0.92
CTNND1O60716 AL589182.2-201ENST00000619332 1049 ntBASIC20.81■□□□□ 0.92
CTNND1O60716 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTNND1O60716 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CTNND1O60716 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNND1O60716 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTNND1O60716 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTNND1O60716 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.8■□□□□ 0.92
CTNND1O60716 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNND1O60716 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNND1O60716 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNND1O60716 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.8■□□□□ 0.92
CTNND1O60716 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNND1O60716 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 AL353593.2-201ENST00000602529 1483 ntBASIC20.8■□□□□ 0.92
CTNND1O60716 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNND1O60716 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNND1O60716 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CTNND1O60716 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.79■□□□□ 0.92
CTNND1O60716 AL020989.1-201ENST00000422979 469 ntBASIC20.79■□□□□ 0.92
CTNND1O60716 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.79■□□□□ 0.92
CTNND1O60716 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.79■□□□□ 0.92
CTNND1O60716 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.79■□□□□ 0.92
CTNND1O60716 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNND1O60716 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.79■□□□□ 0.92
CTNND1O60716 AC002347.1-201ENST00000569543 541 ntBASIC20.79■□□□□ 0.92
CTNND1O60716 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNND1O60716 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTNND1O60716 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CTNND1O60716 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CTNND1O60716 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.79■□□□□ 0.92
CTNND1O60716 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNND1O60716 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CTNND1O60716 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CTNND1O60716 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms