Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 AC113404.2-201ENST00000507884 177 ntBASIC17.55■□□□□ 0.4
DLX3O60479 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.55■□□□□ 0.4
DLX3O60479 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.55■□□□□ 0.4
DLX3O60479 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
DLX3O60479 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DLX3O60479 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.55■□□□□ 0.4
DLX3O60479 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
DLX3O60479 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.55■□□□□ 0.4
DLX3O60479 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.55■□□□□ 0.4
DLX3O60479 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DLX3O60479 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
DLX3O60479 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
DLX3O60479 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DLX3O60479 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.54■□□□□ 0.4
DLX3O60479 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
DLX3O60479 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.54■□□□□ 0.4
DLX3O60479 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.54■□□□□ 0.4
DLX3O60479 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.54■□□□□ 0.4
DLX3O60479 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.54■□□□□ 0.4
DLX3O60479 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.54■□□□□ 0.4
DLX3O60479 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
DLX3O60479 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DLX3O60479 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.54■□□□□ 0.4
DLX3O60479 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.54■□□□□ 0.4
DLX3O60479 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DLX3O60479 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DLX3O60479 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DLX3O60479 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
DLX3O60479 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DLX3O60479 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.53■□□□□ 0.4
DLX3O60479 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.53■□□□□ 0.4
DLX3O60479 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DLX3O60479 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 ECEL1P3-201ENST00000427961 737 ntBASIC17.53■□□□□ 0.4
DLX3O60479 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.53■□□□□ 0.4
DLX3O60479 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 AC116407.2-201ENST00000613639 860 ntBASIC17.53■□□□□ 0.4
DLX3O60479 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 LINC01451-201ENST00000623792 534 ntBASIC17.53■□□□□ 0.4
DLX3O60479 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.53■□□□□ 0.4
DLX3O60479 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DLX3O60479 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
DLX3O60479 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.53■□□□□ 0.4
DLX3O60479 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DLX3O60479 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.52■□□□□ 0.4
DLX3O60479 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DLX3O60479 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DLX3O60479 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DLX3O60479 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.52■□□□□ 0.4
DLX3O60479 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DLX3O60479 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DLX3O60479 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DLX3O60479 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DLX3O60479 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms