Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 BX842568.4-201ENST00000421222 227 ntBASIC17.72■□□□□ 0.43
PCDHGA12O60330 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 AC009154.2-201ENST00000621177 724 ntBASIC17.72■□□□□ 0.43
PCDHGA12O60330 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA12O60330 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA12O60330 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 BICD1-207ENST00000551848 1962 ntBASIC17.71■□□□□ 0.43
PCDHGA12O60330 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 INTS4P1-201ENST00000438455 1935 ntBASIC17.71■□□□□ 0.43
PCDHGA12O60330 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 HNRNPDP1-201ENST00000439535 754 ntBASIC17.71■□□□□ 0.43
PCDHGA12O60330 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGA12O60330 AP001269.4-201ENST00000609611 512 ntBASIC17.71■□□□□ 0.43
PCDHGA12O60330 AC116407.3-201ENST00000623905 1129 ntBASIC17.71■□□□□ 0.43
PCDHGA12O60330 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA12O60330 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA12O60330 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA12O60330 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA12O60330 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PCDHGA12O60330 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.71■□□□□ 0.42
PCDHGA12O60330 LTB4R2-202ENST00000528054 3092 ntBASIC17.7■□□□□ 0.42
PCDHGA12O60330 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms