Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A2O43868 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A2O43868 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC28A2O43868 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A2O43868 TSPY22P-201ENST00000427496 604 ntBASIC17.26■□□□□ 0.35
SLC28A2O43868 KRT18P41-201ENST00000518924 1277 ntBASIC17.26■□□□□ 0.35
SLC28A2O43868 SLC25A1P1-201ENST00000528351 927 ntBASIC17.26■□□□□ 0.35
SLC28A2O43868 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.26■□□□□ 0.35
SLC28A2O43868 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A2O43868 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
SLC28A2O43868 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 PMS2P7-201ENST00000506558 1336 ntBASIC17.25■□□□□ 0.35
SLC28A2O43868 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC28A2O43868 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A2O43868 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC28A2O43868 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC28A2O43868 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SLC28A2O43868 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.25■□□□□ 0.35
SLC28A2O43868 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 TERC-201ENST00000602385 541 ntBASIC17.25■□□□□ 0.35
SLC28A2O43868 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A2O43868 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC28A2O43868 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A2O43868 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A2O43868 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC28A2O43868 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC28A2O43868 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A2O43868 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AL691403.2-201ENST00000618460 490 ntBASIC17.24■□□□□ 0.35
SLC28A2O43868 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC28A2O43868 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A2O43868 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A2O43868 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A2O43868 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SLC28A2O43868 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC28A2O43868 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC28A2O43868 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 AC034236.2-201ENST00000606662 1610 ntBASIC17.23■□□□□ 0.35
SLC28A2O43868 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC28A2O43868 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC28A2O43868 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC28A2O43868 MIR940-201ENST00000401276 94 ntBASIC17.23■□□□□ 0.35
SLC28A2O43868 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms