Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.27■□□□□ 0.04
SSNA1O43805 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.27■□□□□ 0.04
SSNA1O43805 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.27■□□□□ 0.04
SSNA1O43805 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.27■□□□□ 0.04
SSNA1O43805 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSNA1O43805 AC069236.1-201ENST00000604339 616 ntBASIC15.27■□□□□ 0.04
SSNA1O43805 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.27■□□□□ 0.04
SSNA1O43805 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.27■□□□□ 0.04
SSNA1O43805 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.27■□□□□ 0.03
SSNA1O43805 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSNA1O43805 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSNA1O43805 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSNA1O43805 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSNA1O43805 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.27■□□□□ 0.03
SSNA1O43805 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.27■□□□□ 0.03
SSNA1O43805 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSNA1O43805 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SSNA1O43805 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.27■□□□□ 0.03
SSNA1O43805 AC079328.2-201ENST00000561241 3354 ntBASIC15.27■□□□□ 0.03
SSNA1O43805 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SSNA1O43805 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SSNA1O43805 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SSNA1O43805 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SSNA1O43805 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SSNA1O43805 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.26■□□□□ 0.03
SSNA1O43805 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SSNA1O43805 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.26■□□□□ 0.03
SSNA1O43805 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.26■□□□□ 0.03
SSNA1O43805 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.26■□□□□ 0.03
SSNA1O43805 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 AC008694.1-202ENST00000636953 945 ntBASIC15.26■□□□□ 0.03
SSNA1O43805 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.26■□□□□ 0.03
SSNA1O43805 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.26■□□□□ 0.03
SSNA1O43805 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SSNA1O43805 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.26■□□□□ 0.03
SSNA1O43805 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.26■□□□□ 0.03
SSNA1O43805 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SSNA1O43805 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSNA1O43805 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SSNA1O43805 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 AC123595.1-201ENST00000440769 1046 ntBASIC15.25■□□□□ 0.03
SSNA1O43805 RPS2P52-201ENST00000469610 820 ntBASIC15.25■□□□□ 0.03
SSNA1O43805 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.25■□□□□ 0.03
SSNA1O43805 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.25■□□□□ 0.03
SSNA1O43805 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 AL121906.2-201ENST00000621597 723 ntBASIC15.25■□□□□ 0.03
SSNA1O43805 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSNA1O43805 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.25■□□□□ 0.03
SSNA1O43805 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.25■□□□□ 0.03
SSNA1O43805 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms