Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.8□□□□□ -0.36
PAX4O43316 FAM210CP-201ENST00000445714 574 ntBASIC12.8□□□□□ -0.36
PAX4O43316 AC063952.2-201ENST00000498792 1227 ntBASIC12.8□□□□□ -0.36
PAX4O43316 AC022616.7-201ENST00000525383 220 ntBASIC12.8□□□□□ -0.36
PAX4O43316 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.8□□□□□ -0.36
PAX4O43316 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.8□□□□□ -0.36
PAX4O43316 AC024563.2-201ENST00000603282 481 ntBASIC12.8□□□□□ -0.36
PAX4O43316 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 AL391807.1-203ENST00000604392 2365 ntBASIC12.8□□□□□ -0.36
PAX4O43316 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PAX4O43316 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PAX4O43316 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PAX4O43316 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.79□□□□□ -0.36
PAX4O43316 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 AC093677.2-201ENST00000600169 1863 ntBASIC12.79□□□□□ -0.36
PAX4O43316 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 SPDYE15P-201ENST00000424157 909 ntBASIC12.79□□□□□ -0.36
PAX4O43316 KRT18P48-201ENST00000434763 852 ntBASIC12.79□□□□□ -0.36
PAX4O43316 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.79□□□□□ -0.36
PAX4O43316 AC112907.2-201ENST00000448639 330 ntBASIC12.79□□□□□ -0.36
PAX4O43316 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.79□□□□□ -0.36
PAX4O43316 ZNF444P1-201ENST00000559497 298 ntBASIC12.79□□□□□ -0.36
PAX4O43316 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.79□□□□□ -0.36
PAX4O43316 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.79□□□□□ -0.36
PAX4O43316 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.79□□□□□ -0.36
PAX4O43316 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.79□□□□□ -0.36
PAX4O43316 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.79□□□□□ -0.36
PAX4O43316 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.79□□□□□ -0.36
PAX4O43316 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.79□□□□□ -0.36
PAX4O43316 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.79□□□□□ -0.36
PAX4O43316 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PAX4O43316 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PAX4O43316 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PAX4O43316 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.78□□□□□ -0.36
PAX4O43316 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.78□□□□□ -0.36
PAX4O43316 AL024508.2-201ENST00000607749 1894 ntBASIC12.78□□□□□ -0.36
PAX4O43316 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PAX4O43316 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms