Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RRP8O43159 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.76■□□□□ 0.27
RRP8O43159 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RRP8O43159 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RRP8O43159 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.76■□□□□ 0.27
RRP8O43159 MIR4751-201ENST00000578027 74 ntBASIC16.76■□□□□ 0.27
RRP8O43159 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.76■□□□□ 0.27
RRP8O43159 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.76■□□□□ 0.27
RRP8O43159 AL078644.1-201ENST00000609881 752 ntBASIC16.76■□□□□ 0.27
RRP8O43159 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RRP8O43159 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.76■□□□□ 0.27
RRP8O43159 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
RRP8O43159 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RRP8O43159 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RRP8O43159 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RRP8O43159 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.75■□□□□ 0.27
RRP8O43159 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.75■□□□□ 0.27
RRP8O43159 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.75■□□□□ 0.27
RRP8O43159 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.75■□□□□ 0.27
RRP8O43159 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.75■□□□□ 0.27
RRP8O43159 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.75■□□□□ 0.27
RRP8O43159 AC073621.1-201ENST00000392730 636 ntBASIC16.75■□□□□ 0.27
RRP8O43159 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.75■□□□□ 0.27
RRP8O43159 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.75■□□□□ 0.27
RRP8O43159 PAWRP1-201ENST00000451083 565 ntBASIC16.75■□□□□ 0.27
RRP8O43159 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.75■□□□□ 0.27
RRP8O43159 AC004449.1-201ENST00000564240 433 ntBASIC16.75■□□□□ 0.27
RRP8O43159 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.75■□□□□ 0.27
RRP8O43159 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RRP8O43159 AC092865.6-201ENST00000642101 219 ntBASIC16.75■□□□□ 0.27
RRP8O43159 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RRP8O43159 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.75■□□□□ 0.27
RRP8O43159 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
RRP8O43159 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.75■□□□□ 0.27
RRP8O43159 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RRP8O43159 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RRP8O43159 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RRP8O43159 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.74■□□□□ 0.27
RRP8O43159 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.74■□□□□ 0.27
RRP8O43159 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.74■□□□□ 0.27
RRP8O43159 TSEN15P1-201ENST00000423257 515 ntBASIC16.74■□□□□ 0.27
RRP8O43159 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.74■□□□□ 0.27
RRP8O43159 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RRP8O43159 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.74■□□□□ 0.27
RRP8O43159 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RRP8O43159 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RRP8O43159 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RRP8O43159 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RRP8O43159 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RRP8O43159 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RRP8O43159 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RRP8O43159 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RRP8O43159 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RRP8O43159 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms