Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
UBFD1O14562 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBFD1O14562 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.36■□□□□ 0.37
UBFD1O14562 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
UBFD1O14562 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.36■□□□□ 0.37
UBFD1O14562 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
UBFD1O14562 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.36■□□□□ 0.37
UBFD1O14562 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.36■□□□□ 0.37
UBFD1O14562 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBFD1O14562 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBFD1O14562 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
UBFD1O14562 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBFD1O14562 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
UBFD1O14562 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
UBFD1O14562 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.35■□□□□ 0.37
UBFD1O14562 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.35■□□□□ 0.37
UBFD1O14562 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.35■□□□□ 0.37
UBFD1O14562 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.35■□□□□ 0.37
UBFD1O14562 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBFD1O14562 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.34■□□□□ 0.37
UBFD1O14562 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBFD1O14562 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBFD1O14562 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 AP000523.1-201ENST00000398242 1049 ntBASIC17.34■□□□□ 0.37
UBFD1O14562 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.34■□□□□ 0.37
UBFD1O14562 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.34■□□□□ 0.37
UBFD1O14562 AL596275.1-201ENST00000423464 877 ntBASIC17.34■□□□□ 0.37
UBFD1O14562 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.34■□□□□ 0.37
UBFD1O14562 KRT18P65-201ENST00000439811 1286 ntBASIC17.34■□□□□ 0.37
UBFD1O14562 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBFD1O14562 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBFD1O14562 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBFD1O14562 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
UBFD1O14562 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
UBFD1O14562 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.34■□□□□ 0.37
UBFD1O14562 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.34■□□□□ 0.37
UBFD1O14562 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.34■□□□□ 0.37
UBFD1O14562 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.34■□□□□ 0.37
UBFD1O14562 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBFD1O14562 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBFD1O14562 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
UBFD1O14562 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBFD1O14562 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
UBFD1O14562 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
UBFD1O14562 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBFD1O14562 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
UBFD1O14562 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBFD1O14562 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.33■□□□□ 0.37
UBFD1O14562 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.33■□□□□ 0.36
UBFD1O14562 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.33■□□□□ 0.36
UBFD1O14562 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.33■□□□□ 0.36
UBFD1O14562 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBFD1O14562 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms