Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FAM86EP-206ENST00000510506 987 ntBASIC17.08■□□□□ 0.32
RTCAO00442 AC009154.2-201ENST00000621177 724 ntBASIC17.08■□□□□ 0.32
RTCAO00442 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.08■□□□□ 0.32
RTCAO00442 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RTCAO00442 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RTCAO00442 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RTCAO00442 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.07■□□□□ 0.32
RTCAO00442 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 AC006116.8-202ENST00000587620 1550 ntBASIC17.07■□□□□ 0.32
RTCAO00442 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.07■□□□□ 0.32
RTCAO00442 KRT8P47-201ENST00000604727 1398 ntBASIC17.07■□□□□ 0.32
RTCAO00442 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
RTCAO00442 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.07■□□□□ 0.32
RTCAO00442 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 TSPY22P-201ENST00000427496 604 ntBASIC17.07■□□□□ 0.32
RTCAO00442 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.07■□□□□ 0.32
RTCAO00442 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.07■□□□□ 0.32
RTCAO00442 AC011498.5-201ENST00000592027 486 ntBASIC17.07■□□□□ 0.32
RTCAO00442 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.07■□□□□ 0.32
RTCAO00442 AC010331.1-201ENST00000611423 582 ntBASIC17.07■□□□□ 0.32
RTCAO00442 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.07■□□□□ 0.32
RTCAO00442 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.07■□□□□ 0.32
RTCAO00442 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.07■□□□□ 0.32
RTCAO00442 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RTCAO00442 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTCAO00442 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
RTCAO00442 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.06■□□□□ 0.32
RTCAO00442 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 GNAS-203ENST00000306120 1878 ntBASIC17.06■□□□□ 0.32
RTCAO00442 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.06■□□□□ 0.32
RTCAO00442 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 MIR1224-201ENST00000408193 85 ntBASIC17.06■□□□□ 0.32
RTCAO00442 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.06■□□□□ 0.32
RTCAO00442 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
RTCAO00442 AL445228.2-201ENST00000605589 952 ntBASIC17.06■□□□□ 0.32
RTCAO00442 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.06■□□□□ 0.32
RTCAO00442 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.06■□□□□ 0.32
RTCAO00442 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RTCAO00442 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTCAO00442 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTCAO00442 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTCAO00442 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.05■□□□□ 0.32
RTCAO00442 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.05■□□□□ 0.32
RTCAO00442 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.05■□□□□ 0.32
RTCAO00442 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms