Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX39AO00148 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 AC022898.2-201ENST00000616822 1312 ntBASIC20.1■□□□□ 0.81
DDX39AO00148 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX39AO00148 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
DDX39AO00148 AC132008.2-207ENST00000454517 770 ntBASIC20.1■□□□□ 0.81
DDX39AO00148 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX39AO00148 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.1■□□□□ 0.81
DDX39AO00148 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX39AO00148 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX39AO00148 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
DDX39AO00148 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
DDX39AO00148 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
DDX39AO00148 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX39AO00148 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX39AO00148 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
DDX39AO00148 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX39AO00148 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX39AO00148 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
DDX39AO00148 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX39AO00148 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX39AO00148 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.09■□□□□ 0.81
DDX39AO00148 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX39AO00148 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
DDX39AO00148 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
DDX39AO00148 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.09■□□□□ 0.81
DDX39AO00148 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX39AO00148 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
DDX39AO00148 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX39AO00148 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX39AO00148 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
DDX39AO00148 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
DDX39AO00148 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.08■□□□□ 0.81
DDX39AO00148 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.08■□□□□ 0.81
DDX39AO00148 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX39AO00148 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX39AO00148 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.08■□□□□ 0.81
DDX39AO00148 AC007967.3-201ENST00000434308 558 ntBASIC20.08■□□□□ 0.81
DDX39AO00148 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.08■□□□□ 0.81
DDX39AO00148 AF238378.1-201ENST00000526806 358 ntBASIC20.08■□□□□ 0.81
DDX39AO00148 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX39AO00148 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
DDX39AO00148 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX39AO00148 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
DDX39AO00148 REXO1L6P-202ENST00000619970 1078 ntBASIC20.08■□□□□ 0.81
DDX39AO00148 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX39AO00148 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX39AO00148 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DDX39AO00148 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX39AO00148 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.08■□□□□ 0.8
DDX39AO00148 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
DDX39AO00148 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX39AO00148 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.08■□□□□ 0.8
DDX39AO00148 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DDX39AO00148 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.08■□□□□ 0.8
DDX39AO00148 INTS4P1-201ENST00000438455 1935 ntBASIC20.08■□□□□ 0.8
DDX39AO00148 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX39AO00148 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX39AO00148 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
DDX39AO00148 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX39AO00148 NEFHP1-201ENST00000412845 2629 ntBASIC20.07■□□□□ 0.8
DDX39AO00148 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.07■□□□□ 0.8
DDX39AO00148 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.07■□□□□ 0.8
DDX39AO00148 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.07■□□□□ 0.8
DDX39AO00148 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms