Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
USP27XA6NNY8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP27XA6NNY8 PCDHB17P-201ENST00000539533 2393 ntBASIC19.32■□□□□ 0.68
USP27XA6NNY8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.32■□□□□ 0.68
USP27XA6NNY8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.31■□□□□ 0.68
USP27XA6NNY8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 MIR4674-201ENST00000582457 87 ntBASIC19.31■□□□□ 0.68
USP27XA6NNY8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
USP27XA6NNY8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP27XA6NNY8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 AC239809.2-201ENST00000415381 517 ntBASIC19.3■□□□□ 0.68
USP27XA6NNY8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP27XA6NNY8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
USP27XA6NNY8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.29■□□□□ 0.68
USP27XA6NNY8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 MIR3180-5-201ENST00000583743 153 ntBASIC19.29■□□□□ 0.68
USP27XA6NNY8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.29■□□□□ 0.68
USP27XA6NNY8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP27XA6NNY8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP27XA6NNY8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP27XA6NNY8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP27XA6NNY8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP27XA6NNY8 AC009949.1-201ENST00000623048 1830 ntBASIC19.28■□□□□ 0.68
USP27XA6NNY8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 RNF216P1-203ENST00000404404 2427 ntBASIC19.28■□□□□ 0.68
USP27XA6NNY8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP27XA6NNY8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms