Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SRRM3A6NNA2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 SLC25A1P2-201ENST00000430693 912 ntBASIC18.55■□□□□ 0.56
SRRM3A6NNA2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 KRT18P38-201ENST00000449496 1282 ntBASIC18.55■□□□□ 0.56
SRRM3A6NNA2 UNC93B7-201ENST00000509439 705 ntBASIC18.55■□□□□ 0.56
SRRM3A6NNA2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 AC092119.3-201ENST00000612618 583 ntBASIC18.55■□□□□ 0.56
SRRM3A6NNA2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM3A6NNA2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 YBX1P10-201ENST00000444752 975 ntBASIC18.54■□□□□ 0.56
SRRM3A6NNA2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 NPAP1P7-201ENST00000613027 823 ntBASIC18.54■□□□□ 0.56
SRRM3A6NNA2 AL023973.1-201ENST00000624619 620 ntBASIC18.54■□□□□ 0.56
SRRM3A6NNA2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM3A6NNA2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 AL162727.3-201ENST00000635661 2787 ntBASIC18.53■□□□□ 0.56
SRRM3A6NNA2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 AC004980.1-204ENST00000429707 299 ntBASIC18.53■□□□□ 0.56
SRRM3A6NNA2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 C1QL1P1-201ENST00000568105 661 ntBASIC18.53■□□□□ 0.56
SRRM3A6NNA2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 AP000692.2-201ENST00000608391 879 ntBASIC18.53■□□□□ 0.56
SRRM3A6NNA2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
SRRM3A6NNA2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 ZNF444P1-201ENST00000559497 298 ntBASIC18.52■□□□□ 0.56
SRRM3A6NNA2 AL512604.3-201ENST00000569583 964 ntBASIC18.52■□□□□ 0.56
SRRM3A6NNA2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms