Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 AC138028.4-201ENST00000564984 1845 ntBASIC19.4■□□□□ 0.7
CCDC66A2RUB6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 SLC25A6P5-201ENST00000435663 894 ntBASIC19.4■□□□□ 0.7
CCDC66A2RUB6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 AL359736.2-201ENST00000621992 437 ntBASIC19.4■□□□□ 0.7
CCDC66A2RUB6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC66A2RUB6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC66A2RUB6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC66A2RUB6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC66A2RUB6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC66A2RUB6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC66A2RUB6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC66A2RUB6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 PRORSD1P-201ENST00000295112 541 ntBASIC19.39■□□□□ 0.69
CCDC66A2RUB6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 AL023284.2-201ENST00000405850 579 ntBASIC19.39■□□□□ 0.69
CCDC66A2RUB6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.39■□□□□ 0.69
CCDC66A2RUB6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 MCCD1P1-208ENST00000445732 328 ntBASIC19.39■□□□□ 0.69
CCDC66A2RUB6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 DGCR10-201ENST00000609839 495 ntBASIC19.39■□□□□ 0.69
CCDC66A2RUB6 FAM197Y4-202ENST00000622692 608 ntBASIC19.39■□□□□ 0.69
CCDC66A2RUB6 UBALD1-205ENST00000590891 2641 ntBASIC19.39■□□□□ 0.69
CCDC66A2RUB6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC66A2RUB6 PCDHA1-201ENST00000378133 2726 ntBASIC19.38■□□□□ 0.69
CCDC66A2RUB6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 FAM197Y1-201ENST00000421178 764 ntBASIC19.38■□□□□ 0.69
CCDC66A2RUB6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms