Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.62□□□□□ -0.07
DUXBA0A1W2PPF3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUXBA0A1W2PPF3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUXBA0A1W2PPF3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
DUXBA0A1W2PPF3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUXBA0A1W2PPF3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUXBA0A1W2PPF3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.62□□□□□ -0.07
DUXBA0A1W2PPF3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 DDX43P3-201ENST00000441064 443 ntBASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 AC104390.1-201ENST00000555663 520 ntBASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 WWOX-216ENST00000569818 525 ntBASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.61□□□□□ -0.07
DUXBA0A1W2PPF3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 MIR4674-201ENST00000582457 87 ntBASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DUXBA0A1W2PPF3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DUXBA0A1W2PPF3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms