Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 COX5BP2-201ENST00000392354 334 ntBASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 AC103564.2-201ENST00000432853 1299 ntBASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 MTDHP4-201ENST00000600287 670 ntBASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 AC025062.2-201ENST00000605477 670 ntBASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 MIR574-201ENST00000385209 96 ntBASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 RPL13AP23-201ENST00000480739 586 ntBASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 AL671883.3-201ENST00000603274 991 ntBASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 AC023511.2-201ENST00000618803 211 ntBASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV19A0A0A6YYK7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 PMPCAP1-201ENST00000508114 1576 ntBASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AC079776.2-201ENST00000641154 1609 ntBASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AC106730.1-201ENST00000566722 1090 ntBASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AD001527.2-201ENST00000622994 785 ntBASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV19A0A0A6YYK7 AC093503.3-201ENST00000624917 2352 ntBASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms