Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 FAM86GP-201ENST00000448322 971 ntBASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 LINC00628-201ENST00000628516 1289 ntBASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 AC092902.6-201ENST00000641783 218 ntBASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 NCF1C-201ENST00000438382 1427 ntBASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTCH2Q9Y6C5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 AC096633.1-201ENST00000422446 749 ntBASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 AC012645.4-201ENST00000610691 1061 ntBASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCH2Q9Y6C5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 PMS2P4-201ENST00000412466 1052 ntBASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 RHOQP3-201ENST00000437982 621 ntBASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 AC023141.5-201ENST00000458585 616 ntBASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCH2Q9Y6C5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 AC007952.6-201ENST00000573168 2673 ntBASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 AC003957.1-201ENST00000625108 2673 ntBASIC20.08■□□□□ 0.8
PTCH2Q9Y6C5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 AC093214.1-201ENST00000511688 1107 ntBASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCH2Q9Y6C5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 AC148477.5-201ENST00000625164 1645 ntBASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms