Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 SIRPAP1-201ENST00000448467 1770 ntBASIC20.44■□□□□ 0.86
CLIC4Q9Y696 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 AC006011.2-201ENST00000621313 1158 ntBASIC20.44■□□□□ 0.86
CLIC4Q9Y696 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC4Q9Y696 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 KRT18P48-201ENST00000434763 852 ntBASIC20.42■□□□□ 0.86
CLIC4Q9Y696 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC4Q9Y696 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 TSPY5P-201ENST00000426936 936 ntBASIC20.41■□□□□ 0.86
CLIC4Q9Y696 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
CLIC4Q9Y696 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.4■□□□□ 0.86
CLIC4Q9Y696 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms