Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 AC009078.2-202ENST00000463353 338 ntBASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.12■□□□□ 0.49
RAI2Q9Y5P3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 AL022342.1-201ENST00000400363 863 ntBASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 FAAHP1-202ENST00000446499 1238 ntBASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 AC100803.2-201ENST00000562459 1963 ntBASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RAI2Q9Y5P3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 AC011840.4-201ENST00000578471 627 ntBASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 MIR3180-1-201ENST00000580374 94 ntBASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 MIR3180-3-201ENST00000584616 94 ntBASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RAI2Q9Y5P3 HTR7P1-202ENST00000624664 4411 ntBASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAI2Q9Y5P3 KRT18P55-202ENST00000578578 1546 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms