Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 KRT126P-201ENST00000549467 1181 ntBASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 NOC2LP2-201ENST00000407594 1944 ntBASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 AC012317.2-201ENST00000623305 2251 ntBASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN16Q9Y5I7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 REXO1L11P-201ENST00000620964 1927 ntBASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 KRT16P4-201ENST00000453883 522 ntBASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 AL121772.3-201ENST00000610840 674 ntBASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN16Q9Y5I7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 AKR1C7P-201ENST00000305623 895 ntBASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 AL450487.1-201ENST00000426799 995 ntBASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 AC122714.2-201ENST00000502787 707 ntBASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN16Q9Y5I7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms