Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 AL353593.2-201ENST00000602529 1483 ntBASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHAC2Q9Y5I4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 AL513190.1-201ENST00000621254 727 ntBASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 AL096828.2-201ENST00000567259 1965 ntBASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHAC2Q9Y5I4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 AC108073.2-201ENST00000464002 357 ntBASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 DUTP2-201ENST00000519164 463 ntBASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 MTDHP5-201ENST00000598980 586 ntBASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHAC2Q9Y5I4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 AC211486.1-202ENST00000416371 468 ntBASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 AL020989.1-201ENST00000422979 469 ntBASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 HTR5BP-201ENST00000430851 1154 ntBASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 AC211476.1-201ENST00000503899 468 ntBASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 AC019129.2-201ENST00000609837 1235 ntBASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 AL589182.2-201ENST00000619332 1049 ntBASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHAC2Q9Y5I4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHAC2Q9Y5I4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHAC2Q9Y5I4 AC073592.3-201ENST00000625118 1834 ntBASIC21.14■□□□□ 0.97
PCDHAC2Q9Y5I4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHAC2Q9Y5I4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHAC2Q9Y5I4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHAC2Q9Y5I4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHAC2Q9Y5I4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms