Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 AP002383.4-201ENST00000442518 975 ntBASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 WIZP1-201ENST00000531444 2299 ntBASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 AL390961.4-201ENST00000623958 2535 ntBASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA4Q9Y5G9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA4Q9Y5G9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA4Q9Y5G9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA4Q9Y5G9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGA4Q9Y5G9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 CICP6-201ENST00000457191 2729 ntBASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 MIR3180-4-201ENST00000582223 153 ntBASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 AP002414.4-201ENST00000589764 1148 ntBASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA4Q9Y5G9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA4Q9Y5G9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA4Q9Y5G9 AC084018.2-201ENST00000613093 2607 ntBASIC17.69■□□□□ 0.42
PCDHGA4Q9Y5G9 AC126763.1-201ENST00000552015 2118 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms