Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 LINC00304-203ENST00000565008 1864 ntBASIC16.95■□□□□ 0.3
AP4S1Q9Y587 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 PKD1P5-201ENST00000532415 10291 ntBASIC16.95■□□□□ 0.3
AP4S1Q9Y587 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 AC026185.1-201ENST00000445748 174 ntBASIC16.94■□□□□ 0.3
AP4S1Q9Y587 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 AC008622.2-201ENST00000617006 1229 ntBASIC16.94■□□□□ 0.3
AP4S1Q9Y587 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 LINC01126-201ENST00000623515 1646 ntBASIC16.94■□□□□ 0.3
AP4S1Q9Y587 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4S1Q9Y587 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 HLA-J-201ENST00000462773 1622 ntBASIC16.93■□□□□ 0.3
AP4S1Q9Y587 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP4S1Q9Y587 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 AL356309.3-201ENST00000624132 1934 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms