Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 TSPY6P-201ENST00000448518 926 ntBASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 AC008622.2-201ENST00000617006 1229 ntBASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 NFIC-211ENST00000641145 8399 ntBASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 PCDHB19P-201ENST00000570871 2371 ntBASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RCL1Q9Y2P8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 MIR149-201ENST00000384879 89 ntBASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 AC006970.2-201ENST00000450065 779 ntBASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.66□□□□□ -0.06
RCL1Q9Y2P8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 MIR935-201ENST00000401179 91 ntBASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 AC004951.3-201ENST00000418645 1148 ntBASIC14.65□□□□□ -0.06
RCL1Q9Y2P8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms