Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC011840.4-201ENST00000578471 627 ntBASIC23.08■■□□□ 1.29
PDZRN3Q9UPQ7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.08■■□□□ 1.29
PDZRN3Q9UPQ7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDZRN3Q9UPQ7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.08■■□□□ 1.29
PDZRN3Q9UPQ7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.08■■□□□ 1.29
PDZRN3Q9UPQ7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDZRN3Q9UPQ7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDZRN3Q9UPQ7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDZRN3Q9UPQ7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDZRN3Q9UPQ7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.08■■□□□ 1.28
PDZRN3Q9UPQ7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC23.08■■□□□ 1.28
PDZRN3Q9UPQ7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDZRN3Q9UPQ7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDZRN3Q9UPQ7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 NUS1P2-201ENST00000417358 873 ntBASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 FAM197Y8-203ENST00000450145 560 ntBASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 MINOS1P3-201ENST00000457048 203 ntBASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 AC093909.1-201ENST00000504731 1122 ntBASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 RNPS1P1-201ENST00000507437 918 ntBASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 TP73-AS1-207ENST00000624167 988 ntBASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDZRN3Q9UPQ7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 AIRN-201ENST00000601203 4374 ntBASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 AL353692.3-201ENST00000407031 1396 ntBASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 AC099343.3-201ENST00000605834 2503 ntBASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 AL031284.1-201ENST00000419297 478 ntBASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 AF186996.4-201ENST00000467186 377 ntBASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 AP005901.3-202ENST00000581653 237 ntBASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDZRN3Q9UPQ7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PDZRN3Q9UPQ7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms