Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 PTCHD3P3-201ENST00000403073 906 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC114501.2-201ENST00000439631 535 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC114501.1-201ENST00000445949 172 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AL391825.1-201ENST00000457671 1364 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AD001527.2-201ENST00000622994 785 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC009477.1-201ENST00000452936 217 ntBASIC7.25□□□□□ -1.25
MACF1Q9UPN3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC132938.5-201ENST00000624980 1813 ntBASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 MIR1247-201ENST00000408206 136 ntBASIC7.25□□□□□ -1.25
MACF1Q9UPN3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC138627.1-207ENST00000641560 1006 ntBASIC7.25□□□□□ -1.25
MACF1Q9UPN3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC7.25□□□□□ -1.25
MACF1Q9UPN3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC7.24□□□□□ -1.25
MACF1Q9UPN3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC7.24□□□□□ -1.25
MACF1Q9UPN3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MACF1Q9UPN3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC7.24□□□□□ -1.25
MACF1Q9UPN3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MACF1Q9UPN3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MACF1Q9UPN3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms