Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 KRT18P65-201ENST00000439811 1286 ntBASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHA7Q9UN72 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 AC066615.1-201ENST00000640911 628 ntBASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA7Q9UN72 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA7Q9UN72 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA7Q9UN72 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHA7Q9UN72 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 AL136038.4-201ENST00000603606 1261 ntBASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 AC140113.3-201ENST00000605663 199 ntBASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 AC022211.2-201ENST00000585075 2527 ntBASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA7Q9UN72 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 SPDYE15P-201ENST00000424157 909 ntBASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 AC116407.2-201ENST00000613639 860 ntBASIC20.31■□□□□ 0.84
PCDHA7Q9UN72 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms