Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 AC122714.2-201ENST00000502787 707 ntBASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 AL160237.2-201ENST00000556165 472 ntBASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 AC104692.2-201ENST00000603054 253 ntBASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.17■□□□□ 0.66
UBQLN1Q9UMX0 HCG11-201ENST00000411553 5696 ntBASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 AL020996.1-203ENST00000536896 2307 ntBASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 RBM17P3-201ENST00000417687 1192 ntBASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 AC106795.1-205ENST00000512851 1056 ntBASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN1Q9UMX0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 COX5BP2-201ENST00000392354 334 ntBASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 ABCD1P5-201ENST00000445663 754 ntBASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 AC008608.2-201ENST00000606089 416 ntBASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 AP001269.4-201ENST00000609611 512 ntBASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 AC138028.4-201ENST00000564984 1845 ntBASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 KRT18P55-202ENST00000578578 1546 ntBASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN1Q9UMX0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms