Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 MYCLP1-201ENST00000372451 1075 ntBASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 AC105339.3-201ENST00000560043 636 ntBASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 STK25P1-201ENST00000585406 838 ntBASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 AC006557.2-201ENST00000592985 1240 ntBASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 AL671883.3-201ENST00000603274 991 ntBASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 AF228730.7-201ENST00000641842 219 ntBASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 SIRPAP1-201ENST00000448467 1770 ntBASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 AP000997.3-201ENST00000623333 2250 ntBASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 BX005266.1-201ENST00000473402 457 ntBASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 SLC25A1P1-201ENST00000528351 927 ntBASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SYNPO2Q9UMS6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 MIR574-201ENST00000385209 96 ntBASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 IGHV3-52-201ENST00000519770 353 ntBASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 AC012640.2-201ENST00000561606 901 ntBASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 AL020996.1-203ENST00000536896 2307 ntBASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.51■□□□□ 0.87
SYNPO2Q9UMS6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 KLF4P1-201ENST00000412782 1185 ntBASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 SIGLEC30P-201ENST00000455569 941 ntBASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 RPL13AP23-201ENST00000480739 586 ntBASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.5■□□□□ 0.87
SYNPO2Q9UMS6 AC117500.6-201ENST00000624871 588 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms