Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF2IRD1Q9UHL9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2IRD1Q9UHL9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2IRD1Q9UHL9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 AC136632.2-201ENST00000512891 861 ntBASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 AL589182.2-201ENST00000619332 1049 ntBASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 AL353593.2-201ENST00000602529 1483 ntBASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF2IRD1Q9UHL9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 AL020996.1-203ENST00000536896 2307 ntBASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 AL020989.1-201ENST00000422979 469 ntBASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 AC108751.1-201ENST00000490852 363 ntBASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 AC002347.1-201ENST00000569543 541 ntBASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 MIR3687-2-201ENST00000577708 61 ntBASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 AC064836.3-201ENST00000607928 673 ntBASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 MIR3687-1-201ENST00000614492 61 ntBASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
GTF2IRD1Q9UHL9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 SIRPAP1-201ENST00000448467 1770 ntBASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2IRD1Q9UHL9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2IRD1Q9UHL9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AL049757.1-201ENST00000616842 1596 ntBASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms