Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 MIPEPP3-201ENST00000412105 444 ntBASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 AC004911.1-201ENST00000416316 871 ntBASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.77■□□□□ 0.12
COMMD3Q9UBI1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 LINC02199-201ENST00000506655 2702 ntBASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD3Q9UBI1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 PRKY-204ENST00000533551 1019 ntBASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 AC008687.6-201ENST00000596318 630 ntBASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 AC004264.1-201ENST00000608354 794 ntBASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 NBPF21P-201ENST00000425093 1451 ntBASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 KRT8P50-201ENST00000562022 1438 ntBASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
COMMD3Q9UBI1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD3Q9UBI1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD3Q9UBI1 SDHAP2-201ENST00000455183 2001 ntBASIC15.75■□□□□ 0.11
COMMD3Q9UBI1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COMMD3Q9UBI1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD3Q9UBI1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD3Q9UBI1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD3Q9UBI1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms