Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 FDX1P1-201ENST00000449115 551 ntBASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 AC009533.2-201ENST00000543664 586 ntBASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 AC011467.2-201ENST00000598425 242 ntBASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 AC138028.4-201ENST00000564984 1845 ntBASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMG20BQ9P0W2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 KRT8P47-201ENST00000604727 1398 ntBASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 FLJ13224-201ENST00000313737 1514 ntBASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 NOC2LP2-201ENST00000407594 1944 ntBASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 INTS4P1-201ENST00000438455 1935 ntBASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 AC009078.2-202ENST00000463353 338 ntBASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HMG20BQ9P0W2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 AC020763.4-201ENST00000623414 4170 ntBASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 AC132008.2-207ENST00000454517 770 ntBASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMG20BQ9P0W2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 SAPCD2P3-201ENST00000455031 850 ntBASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 AL160237.2-201ENST00000556165 472 ntBASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 AL121912.1-201ENST00000603683 238 ntBASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMG20BQ9P0W2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms