Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 FAM197Y1-201ENST00000421178 764 ntBASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 AP000593.1-201ENST00000393668 712 ntBASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 FSCN1P1-201ENST00000568912 1481 ntBASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTLC3Q9NUV7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 AC034236.2-201ENST00000606662 1610 ntBASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.71■□□□□ 0.75
SPTLC3Q9NUV7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 LINC01126-201ENST00000623515 1646 ntBASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 AC096733.2-201ENST00000609937 1394 ntBASIC19.7■□□□□ 0.74
SPTLC3Q9NUV7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms