Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 AC092647.4-201ENST00000457211 535 ntBASIC15.17■□□□□ 0.02
HES4Q9HCC6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HES4Q9HCC6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HES4Q9HCC6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HES4Q9HCC6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HES4Q9HCC6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HES4Q9HCC6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.17■□□□□ 0.02
HES4Q9HCC6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HES4Q9HCC6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 IGHGP-201ENST00000390555 1178 ntBASIC15.16■□□□□ 0.02
HES4Q9HCC6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 AC022616.7-201ENST00000525383 220 ntBASIC15.16■□□□□ 0.02
HES4Q9HCC6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HES4Q9HCC6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.16■□□□□ 0.02
HES4Q9HCC6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 DUX4L26-201ENST00000489078 1255 ntBASIC15.15■□□□□ 0.02
HES4Q9HCC6 ZNF444P1-201ENST00000559497 298 ntBASIC15.15■□□□□ 0.02
HES4Q9HCC6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.15■□□□□ 0.02
HES4Q9HCC6 AC004263.2-201ENST00000617183 678 ntBASIC15.15■□□□□ 0.02
HES4Q9HCC6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 LINC01311-201ENST00000565162 1445 ntBASIC15.15■□□□□ 0.02
HES4Q9HCC6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.15■□□□□ 0.02
HES4Q9HCC6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HES4Q9HCC6 AC100803.2-201ENST00000562459 1963 ntBASIC15.15■□□□□ 0.02
HES4Q9HCC6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms