Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 AL355075.4-201ENST00000554988 638 ntBASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 HMGA1P5-201ENST00000412453 271 ntBASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 NAPSB-206ENST00000562112 1266 ntBASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR2J3Q9H1A7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 AL023806.1-201ENST00000603994 1649 ntBASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 SNORA78-201ENST00000459373 127 ntBASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 MIR3917-201ENST00000580971 93 ntBASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR2J3Q9H1A7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms