Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 AL499627.1-201ENST00000569373 2188 ntBASIC14.53□□□□□ -0.08
NKX6-2Q9C056 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 AC104640.1-201ENST00000562617 2109 ntBASIC14.53□□□□□ -0.08
NKX6-2Q9C056 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX6-2Q9C056 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 PAUPAR-201ENST00000630360 2965 ntBASIC14.52□□□□□ -0.08
NKX6-2Q9C056 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-2Q9C056 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 AL355472.2-201ENST00000422958 438 ntBASIC14.52□□□□□ -0.09
NKX6-2Q9C056 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 RAP2CP1-201ENST00000605103 478 ntBASIC14.52□□□□□ -0.09
NKX6-2Q9C056 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-2Q9C056 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 AC010980.2-201ENST00000587099 1412 ntBASIC14.51□□□□□ -0.09
NKX6-2Q9C056 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 AL513523.2-202ENST00000427283 2040 ntBASIC14.51□□□□□ -0.09
NKX6-2Q9C056 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-2Q9C056 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms