Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 NUS1P1-201ENST00000446295 882 ntBASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM62Q9BVG3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
TRIM62Q9BVG3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 IGHV3-47-201ENST00000425060 335 ntBASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 AC005336.2-201ENST00000593183 939 ntBASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM62Q9BVG3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 AP005901.3-202ENST00000581653 237 ntBASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 BX276092.7-203ENST00000637198 1536 ntBASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM62Q9BVG3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 PRELID1P1-202ENST00000567272 903 ntBASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms