Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 AP001094.4-201ENST00000579008 2176 ntBASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 HTR7P1-201ENST00000538670 1336 ntBASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFAF3Q9BU61 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 REXO1L12P-201ENST00000622156 912 ntBASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 AC113410.3-201ENST00000623366 203 ntBASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFAF3Q9BU61 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 AC105020.1-201ENST00000435356 2205 ntBASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 AL355355.2-201ENST00000442321 338 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms