Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 MIR3180-4-201ENST00000582223 153 ntBASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 DUTP2-201ENST00000519164 463 ntBASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 FITM1-202ENST00000559294 800 ntBASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 AC024243.1-201ENST00000609234 778 ntBASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 AC116562.4-202ENST00000641738 218 ntBASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
HDHD3Q9BSH5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 SEC1P-202ENST00000473944 940 ntBASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 AC133963.1-201ENST00000504166 1679 ntBASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.12■□□□□ 0.01
HDHD3Q9BSH5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms