Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VGLL1Q99990 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VGLL1Q99990 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.61□□□□□ -0.23
VGLL1Q99990 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VGLL1Q99990 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.6□□□□□ -0.23
VGLL1Q99990 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VGLL1Q99990 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 PRORSD1P-201ENST00000295112 541 ntBASIC13.6□□□□□ -0.23
VGLL1Q99990 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.6□□□□□ -0.23
VGLL1Q99990 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.6□□□□□ -0.23
VGLL1Q99990 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.6□□□□□ -0.23
VGLL1Q99990 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.6□□□□□ -0.23
VGLL1Q99990 AP001412.1-201ENST00000608405 714 ntBASIC13.6□□□□□ -0.23
VGLL1Q99990 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.6□□□□□ -0.23
VGLL1Q99990 AL023803.3-201ENST00000615559 522 ntBASIC13.6□□□□□ -0.23
VGLL1Q99990 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 AL049637.2-201ENST00000641778 930 ntBASIC13.6□□□□□ -0.23
VGLL1Q99990 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VGLL1Q99990 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.6□□□□□ -0.23
VGLL1Q99990 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.6□□□□□ -0.23
VGLL1Q99990 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VGLL1Q99990 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VGLL1Q99990 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.59□□□□□ -0.23
VGLL1Q99990 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.59□□□□□ -0.23
VGLL1Q99990 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.59□□□□□ -0.23
VGLL1Q99990 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.59□□□□□ -0.23
VGLL1Q99990 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 AL158047.1-201ENST00000445918 881 ntBASIC13.59□□□□□ -0.23
VGLL1Q99990 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 AP005242.2-201ENST00000580065 1175 ntBASIC13.59□□□□□ -0.23
VGLL1Q99990 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.59□□□□□ -0.23
VGLL1Q99990 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 AL355312.1-201ENST00000407115 2176 ntBASIC13.59□□□□□ -0.23
VGLL1Q99990 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.59□□□□□ -0.23
VGLL1Q99990 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VGLL1Q99990 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
VGLL1Q99990 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
VGLL1Q99990 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VGLL1Q99990 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.58□□□□□ -0.23
VGLL1Q99990 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms