Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.63■■□□□ 1.37
ABCA3Q99758 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
ABCA3Q99758 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.63■■□□□ 1.37
ABCA3Q99758 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.63■■□□□ 1.37
ABCA3Q99758 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 METTL26-204ENST00000397665 558 ntTSL 2 BASIC23.63■■□□□ 1.37
ABCA3Q99758 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC23.63■■□□□ 1.37
ABCA3Q99758 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.63■■□□□ 1.37
ABCA3Q99758 DAD1-205ENST00000543337 501 ntTSL 3 BASIC23.63■■□□□ 1.37
ABCA3Q99758 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.63■■□□□ 1.37
ABCA3Q99758 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC23.63■■□□□ 1.37
ABCA3Q99758 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
ABCA3Q99758 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.63■■□□□ 1.37
ABCA3Q99758 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.63■■□□□ 1.37
ABCA3Q99758 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.63■■□□□ 1.37
ABCA3Q99758 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ABCA3Q99758 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
ABCA3Q99758 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
ABCA3Q99758 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.62■■□□□ 1.37
ABCA3Q99758 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.62■■□□□ 1.37
ABCA3Q99758 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
ABCA3Q99758 PTCHD3P3-201ENST00000403073 906 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 AL355306.1-201ENST00000415580 579 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.62■■□□□ 1.37
ABCA3Q99758 AC067863.1-201ENST00000494933 530 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 STK19B-204ENST00000512515 211 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
ABCA3Q99758 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
ABCA3Q99758 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC23.62■■□□□ 1.37
ABCA3Q99758 AC109462.3-201ENST00000573934 613 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.62■■□□□ 1.37
ABCA3Q99758 AF228730.6-201ENST00000641497 218 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 AC084121.3-201ENST00000641716 218 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 AC105233.6-201ENST00000642093 218 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
ABCA3Q99758 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
ABCA3Q99758 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
ABCA3Q99758 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC23.62■■□□□ 1.37
ABCA3Q99758 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ABCA3Q99758 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.62■■□□□ 1.37
ABCA3Q99758 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.62■■□□□ 1.37
ABCA3Q99758 AC236430.1-201ENST00000402231 743 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.62■■□□□ 1.37
ABCA3Q99758 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC23.62■■□□□ 1.37
ABCA3Q99758 STK25P1-201ENST00000585406 838 ntBASIC23.62■■□□□ 1.37
ABCA3Q99758 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.61■■□□□ 1.37
ABCA3Q99758 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.61■■□□□ 1.37
ABCA3Q99758 COX5BP2-201ENST00000392354 334 ntBASIC23.61■■□□□ 1.37
ABCA3Q99758 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC23.61■■□□□ 1.37
ABCA3Q99758 CXCL1P1-201ENST00000502804 216 ntBASIC23.61■■□□□ 1.37
ABCA3Q99758 NMU-203ENST00000507338 658 ntTSL 3 BASIC23.61■■□□□ 1.37
ABCA3Q99758 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ABCA3Q99758 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
ABCA3Q99758 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 POLD4-211ENST00000539074 714 ntTSL 3 BASIC23.6■■□□□ 1.37
ABCA3Q99758 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC23.6■■□□□ 1.37
ABCA3Q99758 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.6■■□□□ 1.37
ABCA3Q99758 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.6■■□□□ 1.37
ABCA3Q99758 REM2-202ENST00000536884 1331 ntTSL 2 BASIC23.6■■□□□ 1.37
ABCA3Q99758 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.6■■□□□ 1.37
ABCA3Q99758 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ABCA3Q99758 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.59■■□□□ 1.37
ABCA3Q99758 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
ABCA3Q99758 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.59■■□□□ 1.37
ABCA3Q99758 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 MEIS3P1-201ENST00000495167 958 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms