Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 MIR3180-5-201ENST00000583743 153 ntBASIC14.54□□□□□ -0.08
RAB40CQ96S21 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.54□□□□□ -0.08
RAB40CQ96S21 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 AC036111.1-201ENST00000533973 1582 ntBASIC14.54□□□□□ -0.08
RAB40CQ96S21 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.54□□□□□ -0.08
RAB40CQ96S21 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 AC099343.3-201ENST00000605834 2503 ntBASIC14.54□□□□□ -0.08
RAB40CQ96S21 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40CQ96S21 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40CQ96S21 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 LINC01126-201ENST00000623515 1646 ntBASIC14.53□□□□□ -0.08
RAB40CQ96S21 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 KRT8P7-201ENST00000533003 1432 ntBASIC14.53□□□□□ -0.08
RAB40CQ96S21 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 RPS2P4-201ENST00000476944 856 ntBASIC14.53□□□□□ -0.08
RAB40CQ96S21 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 AC233263.1-201ENST00000578059 224 ntBASIC14.53□□□□□ -0.08
RAB40CQ96S21 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 AC073648.6-201ENST00000641589 218 ntBASIC14.53□□□□□ -0.08
RAB40CQ96S21 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40CQ96S21 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40CQ96S21 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB40CQ96S21 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB40CQ96S21 HLA-J-201ENST00000462773 1622 ntBASIC14.52□□□□□ -0.08
RAB40CQ96S21 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 HOXB1-202ENST00000577092 1414 ntBASIC14.52□□□□□ -0.08
RAB40CQ96S21 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB40CQ96S21 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB40CQ96S21 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 AC022898.2-201ENST00000616822 1312 ntBASIC14.52□□□□□ -0.08
RAB40CQ96S21 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40CQ96S21 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms