Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 GMCL1P1-201ENST00000463439 1581 ntBASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 NKAPP1-205ENST00000585790 367 ntBASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 AC140113.2-201ENST00000604370 208 ntBASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 Z83851.2-201ENST00000609564 659 ntBASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 AC107918.4-202ENST00000641623 219 ntBASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 MED15P5-201ENST00000423150 992 ntBASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 MTDHP4-201ENST00000600287 670 ntBASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 ESPNP-201ENST00000270691 2015 ntBASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 AC073592.3-201ENST00000625118 1834 ntBASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SYNGAP1Q96PV0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 AC007967.3-201ENST00000434308 558 ntBASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 RNA5SP415-201ENST00000517246 115 ntBASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.27■□□□□ 0.83
SYNGAP1Q96PV0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 NEFHP1-201ENST00000412845 2629 ntBASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNGAP1Q96PV0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms