Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 AC113347.1-201ENST00000413321 391 ntBASIC13.23□□□□□ -0.29
ODF3Q96PU9 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.23□□□□□ -0.29
ODF3Q96PU9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 AC139713.2-201ENST00000641328 2723 ntBASIC13.23□□□□□ -0.29
ODF3Q96PU9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ODF3Q96PU9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ODF3Q96PU9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 AL023806.1-201ENST00000603994 1649 ntBASIC13.22□□□□□ -0.29
ODF3Q96PU9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 TSPY12P-201ENST00000421279 868 ntBASIC13.22□□□□□ -0.29
ODF3Q96PU9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 AC097493.4-201ENST00000641197 219 ntBASIC13.22□□□□□ -0.29
ODF3Q96PU9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ODF3Q96PU9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ODF3Q96PU9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 AL355312.1-201ENST00000407115 2176 ntBASIC13.21□□□□□ -0.29
ODF3Q96PU9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 TNRC18P3-201ENST00000441896 2691 ntBASIC13.21□□□□□ -0.29
ODF3Q96PU9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ODF3Q96PU9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ODF3Q96PU9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms